I got some feedback to the following pull request after it was merged: https://github.com/entireio/cli/pull/1507

Use entire to capture the context of the latest checkpoint in this branch and apply the suggestions to the currently checked out branch.

Base directory for this skill: /Users/pfleidi/.claude/plugins/cache/entire-skills/entire/0.7.0/skills/explain

Explain Intent

Explain the intent behind source code by tracing it back to the original conversation where it was created. Works with:

• Functions — Why does this function exist? What problem was it solving?
• Files — What's the purpose of this file? What requirements drove its creation?
• Line changes — Why was this specific line added or modified?

Response Format

Begin the first response to this skill invocation with the line:

Entire Explain:

followed by a blank line, then the content.

• Apply the header to the first response of the invocation only. Do not re-print it on follow-up turns within the same invocation (e.g. after the user answers a clarifying question).
• Do not include the header on error or early-exit responses (e.g. "Entire CLI is required but not installed", "this file is not tracked by git", "no session transcript was found for this commit"). The header's presence should signal that the skill ran and produced real output.

Process

1. Verify the entire CLI is installed by running entire version.
   • If the command is not found, stop and tell the user: "The Entire CLI is required but not installed. Install it from https://entire.io/docs/cli and try again."
2. Use a Haiku agent to identify the commit that introduced the code via git blame or git log.
   • If the file is not tracked by git, stop and tell the user: "This file is not tracked by git, so I can't trace its history."
   • If git blame returns no useful result (e.g., the code is uncommitted), stop and tell the user: "This code hasn't been committed yet, so there's no history to trace."
3. Use a Sonnet agent to read the session transcript via entire explain --no-pager --commit COMMIT_SHA.
   • If the command fails or returns no transcript, stop and tell the user: "No session transcript was found for this commit. It may have been created outside of an Entire session (e.g., a manual commit)."

continue

Okay, let's keep the helper. Are there any other changes introduced by this PR we should update?

Commit the current changes and then apply the copilot suggestion to see what it would look like.

commit and continue

continue

continue

commit and continue

Base directory for this skill: /Users/pfleidi/.agents/skills/pfleidi/skills/review

Code Review

1. Determine Diff Against origin/main

Always review changes against origin/main directly. Do not use local main, git merge-base, a PR base branch, or a user-specified alternate base.

Get the CURRENT diff — never use cached results from earlier in the conversation. Include both committed and uncommitted changes (staged + unstaged):

Note: git diff origin/main (not origin/main...HEAD) diffs origin/main against the working tree, capturing committed changes, staged changes, and unstaged changes in one pass.

Show the user the file list and total count. If there are 0 changed files, report that to the user and stop — there is nothing to review. Otherwise, immediately proceed to the review agents. Do NOT wait for confirmation.

Before launching agents, build a concise review context and pass it to every agent. Show the context as a table before launching agents so assumptions are visible:

• The user's request and any implementation plan, design notes, or acceptance criteria provided in the conversation.
• Branch commit messages from git log --oneline origin/main..HEAD.
• PR title/body when a PR exists for the branch.
• The changed-file list and any obvious intended behavior changes inferred from commits, tests, docs, or user-facing text.

Treat this context as the statement of intent. If no implementation plan or PR context exists, say that intent is inferred from the diff and commits only.

2. Spawn Parallel Review Agents

Review Philosophy

Pass these rules to every agent:

• It is OK to find nothing. A clean review is a valid outcome. Do NOT manufacture findings to justify the review. Only flag issues you are confident are real problems.
• Be opinionated and consistent. If a pattern is acceptable, don't flag it. If you flag something, commit to that position — don't suggest the opposite approach on a re-review.
• Don't flag trade-offs with no clear winner. If there are two reasonable approaches and neither is clearly better, don't flag it. The author already made a choice.
• High confidence only. Every finding must pass the bar: "I am confident this is a problem, and I can explain specifically what goes wrong if it's not fixed." Vague unease is not a finding.
• Permission-friendly reads. Avoid shell pipelines, command separators, subshells, and output filters for read-only investigation because they create extra permission prompts and block background review agents. Do not run commands like git show HEAD:path | sed -n '10,40p'. Use workspace file range reads, rg with path limits, path-scoped git diff $BASE -- <path>, or one standalone git show <rev>:<path> only when the output is acceptably small.
• Intent-aware review. Review changed code against the review context, not against the old behavior alone. Do not classify an intentional behavior change as Required merely because it differs from origin/main. A Required finding must either contradict stated intent, break an existing contract that the intent did not change, introduce a concrete bug/security issue, or leave the intended behavior unverified in a way that would likely fail.

Launch four baseline sub-agents in parallel using the Agent tool. Pass each agent origin/main as the base ref, the full list of changed files, the review context, and the review philosophy above.

When the repository is a Go project and the diff includes Go-related files (*.go, go.mod, or go.sum), also launch Agent 5 in the same batch. Do not run the Go-specific agent for non-Go diffs.

Agent 1: Security & Adversarial

Review git diff $BASE with fresh eyes for:

• Injection — command injection, SQL injection, path traversal
• TOCTOU and race conditions — check-then-act patterns, concurrent access without synchronization
• Unvalidated input at system boundaries — user input, API parameters, external data
• Auth/authz gaps — missing permission checks, privilege escalation paths
• Secrets or credentials — hardcoded tokens, leaked keys, credentials in code or config

For EACH finding: read the actual source file and trace whether the code path is reachable in production. Discard any finding you cannot confirm with a concrete code reference.

Agent 2: Correctness & Quality

Review git diff $BASE for:

• Logic errors — off-by-one, wrong comparison, inverted conditions
• Nil/null handling — unchecked nil dereferences, missing error checks (especially unchecked errors in Go)
• Edge cases in concurrency — goroutine leaks, missing locks, channel misuse, deferred unlock ordering
• Redundant state — state that duplicates existing state, cached values that could be derived
• Production test seams — mutable function variables, package-wide settings, reset hooks, or exported knobs added only so tests can swap behavior instead of using dependency injection or a higher-scope test
• Parameter sprawl — adding new parameters instead of restructuring
• Leaky abstractions — exposing internal details, breaking existing abstraction boundaries
• Stringly-typed code — using raw strings where constants or typed values already exist in the codebase
• Test coverage and scope gaps — changed behavior, edge cases, or error paths not exercised by meaningful tests; tests that prove implementation details instead of behavior; or unit tests used where integration/e2e coverage is the right confidence boundary
• Test helper over-abstraction — helpers that hide the behavior, expected values, or assertions and make the test harder to understand than a small amount of duplication

For EACH finding: verify the claim by reading the source. Check call sites to confirm the issue is real, not hypothetical.

Agent 3: Simplification & Efficiency

Review git diff $BASE for:

• Dead code — unreachable branches, unused functions, struct fields that are never read
• Code reuse — search for existing utilities and helpers that could replace newly written code; flag duplicated functionality
• Copy-paste with variation — near-duplicate blocks that should be unified
• Unnecessary abstractions — wrapper types, indirection, or overly defensive fallbacks that mask errors
• Unnecessary work — redundant computations, repeated file reads, duplicate API calls, N+1 patterns
• Missed concurrency — independent operations run sequentially when they could be parallel
• Hot-path bloat — blocking work added to startup or per-request paths
• Unnecessary existence checks — pre-checking file/resource existence before operating (TOCTOU anti-pattern); operate directly and handle the error
• Unnecessary comments — comments explaining WHAT the code does (well-named identifiers already do that); keep only non-obvious WHY

For EACH suggestion: verify it does not break existing behavior by checking call sites and usages. Discard cosmetic-only suggestions (renames, formatting).

Agent 4: Readability & Go Idioms

Review git diff $BASE for code that is hard to read, maintain, or reason about:

• Poor factoring — functions doing multiple jobs, tangled control flow, or missing helper extraction where a small local helper would clarify behavior
• Mixed abstraction levels — high-level orchestration mixed with low-level IO, parsing, protocol, or data-structure details; low-level helpers that also make workflow or policy decisions
• Generated-code smell — repetitive pasted logic, shallow wrappers, generic names, or code that reads like it was assembled without domain intent
• Data-flow opacity — values transformed across too many steps, unclear ownership, hidden mutation, pass-through helper chains, or state threaded through unrelated code
• Control-flow complexity — deeply nested conditionals, boolean flag plumbing, early returns used inconsistently, or error paths that obscure the main path
• Naming clarity — names that hide domain meaning or force callers to inspect implementation to understand usage
• Go API readability — ambiguous (result, bool) returns outside clear comma-ok/presence checks, oversized interfaces, unnecessary pointer indirection, or cleverness where explicit Go would be clearer
• Error readability — errors that lose operation/context, wrap inconsistently, or make call sites branch on strings/booleans instead of clear errors or typed status

For EACH finding: explain the readability cost in concrete maintenance terms. Prefer small, local refactor suggestions. Discard formatting-only, gofmt-only, or personal taste comments.

Agent 5: Clean Go & Modern Go (Go diffs only)

Use the local pfleidi:clean-go skill as the source of truth: skills/pfleidi/clean-go/SKILL.md.

Review only changed Go code plus surrounding source, tests, interfaces, and call sites needed to verify findings. Apply the skill's Clean Go checks and version-gated Modern Go checks. This includes the modern-go guidance incorporated from JetBrains' use-modern-go skill: detect the relevant go.mod target version, only suggest features available for that version, and do not perform blanket modernization.

Focus on concrete changed-code findings around composable functions, abstraction level, function size/signatures, errors, pointers, small interfaces, any/interface{}, testing guidance from skills/pfleidi/testing/SKILL.md, and modern standard-library helpers. Discard findings that would merely restyle existing code or require a broad rewrite unrelated to the current diff.

Second-Pass Coverage Sweep

After the first-pass agents complete, run a second independent review pass before synthesis. The goal is recall: catch high-confidence findings that the lens-specific agents may have missed.

Launch one fresh coverage agent with origin/main as the base ref, the full list of changed files, the review context, and the review philosophy above. Do not pass the first-pass findings to this agent.

Ask the coverage agent to:

• Re-read the changed files and the surrounding code needed to understand each changed path.
• Trace changed behavior through callers, callees, tests, configuration, migrations, generated interfaces, and user/API entry points where relevant.
• Search the repository for related patterns, duplicated logic, and existing helpers that affect the changed code.
• Look across all lenses together: security, correctness, tests, simplification, readability, performance, and Go cleanliness when applicable.
• Prioritize missed Required findings over optional improvements.
• Return only high-confidence findings with concrete file:line evidence and a short explanation of the traced path.

Then compare the second-pass findings with the first-pass findings. Deduplicate overlaps, verify any new claim by reading source yourself, and discard anything that cannot be confirmed.

3. Synthesize Report

After all launched agents complete:

1. Collect findings from both the first-pass agents and the second-pass coverage sweep
2. Deduplicate — merge findings from different agents that point to the same underlying issue
3. Verify — for any finding where the agent did not cite a specific file:line with evidence, read the source and confirm or discard it
4. Group by file
5. Sort by severity within each file: Critical > High > Medium > Low

Severity Definitions

• Critical — Must fix before merge. Bugs, security vulnerabilities, data loss risk, race conditions with observable impact.
• High — Should fix before merge. Missing error handling, meaningful test gaps, performance issues on hot paths.
• Medium — Worth fixing. Code reuse opportunities, unnecessary complexity, readability problems that make future changes error-prone, minor efficiency improvements.
• Low — Optional. Minor readability improvements or cosmetic suggestions.

Relevance Classification

For each finding, classify as:

• Required — The change does not work correctly without this fix in light of the review context. Bugs, missing error handling that causes failures, security vulnerabilities, race conditions, contradictions of stated intent, or missing tests for intended behavior that would likely fail. The branch should not merge without addressing these.
• Improvement — Valid finding, but the change works correctly without it. Better factoring, clearer Go APIs, using existing helpers, code reuse, unnecessary complexity, style. Worth addressing in a follow-up, not in this branch.

Autofix Eligibility

Mark each Required finding as Autofix eligible or Needs decision:

• Autofix eligible — source-backed, high confidence, minimal fix is clear, no new dependencies, no shared/public interface change, no product/design choice, no broad refactor, and the directly related verification path is clear.
• Needs decision — any Required finding that fails one of the autofix checks, including intentional behavior questions, API shape changes, cross-cutting refactors, or fixes where multiple reasonable approaches exist.

Present findings as compact tables, not prose blocks. Use one summary table for scanning and one details table for evidence and fixes.

Summary table format:

Details table format:

Keep table cells short and scannable. Put the smallest useful quote or evidence in the table rather than full paragraphs. Escape | characters inside code or text so the table remains valid Markdown. Use n/a for Autofix on Improvements. The Sources column lists the agents that independently found or confirmed the issue, such as security, correctness, readability, clean-go, or coverage.

If no findings exist at a severity level, omit that section.

If there are 0 findings across all agents, report that the review is clean and stop.

4. Present Report and Proceed With Default Fixes

Present findings in two sections:

Required

Table of findings classified as Required, sorted by severity. Include the Autofix value for each finding. Follow it with the details table for those same Required findings.

Improvements (follow-up)

Table of findings classified as Improvement, continuing the numbering. These are presented for awareness but are NOT included in the fix cycle by default. Follow it with the details table for those same Improvement findings.

End with a one-paragraph summary: total required vs improvement findings, overall merge-readiness assessment, and any patterns across files.

Before editing, present a planned-autofix table for Autofix eligible Required findings:

Do not ask the user to choose a mode. Immediately proceed to Step 5 for Autofix eligible Required findings after showing the planned-autofix table. Do not fix Improvements by default.

If there are Required findings but none are Autofix eligible, stop after the report and list the exact decisions needed.

5. Fix Cycle

Scope Rules

• Make the MINIMAL change that addresses the finding
• Keep the diff limited to files and lines directly required by the finding
• First decide whether the finding is local or systemic. Fix at the narrowest correct level; do not add a local workaround that hides a shared/root-cause bug.
• If the finding requires a behavior-changing code fix, add or update the directly related test in the same fix step. Prefer TDD, but complete the focused red-to-green cycle before stopping: write/update the failing test, confirm it fails, implement the fix, confirm the focused test passes. Do not stop after only adding the failing test unless the user explicitly asks.
• Do NOT rename variables, reformat code, or touch lines outside the finding scope
• Do NOT refactor adjacent code, even if it looks related
• Do NOT create any git commits — code changes only

Default Batched Fixes

Fix all Autofix eligible Required findings in report order by default. Do not ask which findings to fix.

Choose an artifact directory using the AGENTS.md temporary artifact rule with agent name pfleidi-review:

• Use ./tmp/pfleidi-review/ only when ./tmp/ already exists and is already ignored.
• If no project-local artifact directory is available, do not create file artifacts by default; keep ledger/log/cache information in the response and mark file paths n/a. Ask before using /tmp/pfleidi-review/ or modifying ignore files.

When an artifact directory is available, create a temporary fix ledger at <artifact-dir>/review-<repo-name>-<timestamp>.md before editing. If no artifact directory is available, keep the same ledger fields in the final summary table instead. Update the ledger after each finding with:

• Finding number, status, and source location.
• Files touched.
• What changed and why.
• Related tests or verification commands.
• Rollback notes sufficient for the user to understand how to revert the finding-specific change manually.

For each Autofix eligible finding:

• Read the relevant code to confirm the fix approach
• Re-check eligibility before editing; if the fix is no longer clearly eligible, mark it Needs decision and continue to the next finding
• Implement the fix — ONLY the code changes for that single finding
• Add or update the directly related test in the same diff when the fix changes behavior; if using TDD, complete red-to-green before moving on; if no test is added, state why
• Keep the diff limited to files and lines directly required by that finding
• If a fix would require changing a function signature in a shared interface, adding a dependency, expanding scope outside the finding, or making an ambiguous product/design choice, skip that finding as Needs decision and continue
• Track the exact files changed, what changed, and why the change addresses the finding

If a skipped finding has partial edits, remove only your own partial edits for that finding before continuing. If you cannot safely isolate those partial edits, stop and explain the conflict.

After all eligible fixes are applied, proceed directly to Step 6 (Verify Fixes). Do NOT show a diff yet.

6. Verify Fixes

Run the project's compile/build, lint, and test commands scoped to only the changed files and their directly related tests. Use safe background batches for independent validators instead of running every command sequentially.

When selecting verification commands, reuse <artifact-dir>/verification-<repo-name>.md if an artifact directory is available and the cache is fresh under the cache rules from pfleidi:pr; otherwise discover the smallest relevant lint/test/build commands. Update the cache only when an artifact directory is available.

• Build / compile — run a relevant compile/build command when one is discoverable for the changed production code.
• Lint / static analysis — run the project's documented lint task, scoped to the files that were modified by the fixes when the task supports scoping. Prefer lint-specific task wrappers such as make lint or mise run lint over invoking linter binaries directly. Do not use aggregate check, ci, or verify tasks unless you have confirmed they only run lint/static analysis. If the documented lint task cannot be scoped, run the smallest relevant project lint task.
• Tests — run only the test files that cover the modified code (same package, same module, co-located test files). Do NOT run the full test suite.

If no compile/build command or project lint task exists, state that explicitly instead of assuming an unavailable command.

Run formatters, generators, snapshot updates, or other mutating commands alone before validators that depend on their output. Run independent read-only validators concurrently when they do not require the same exclusive service, port, database, fixture directory, or generated output. Keep integration/e2e/service-backed commands separate unless the project documents that they are parallel-safe.

For each background batch, start every command from the same working-tree state, capture stdout/stderr/exit status from the tool, do not edit files while the batch is running, and wait for every command to finish. Run each selected validator directly, for example mise run lint, go test ..., or npm test -- .... Do not wrap validators in sh -c, shell redirection, tee, command separators, or pipelines solely to write logs; that defeats command-prefix approvals and causes extra permission prompts. If an artifact directory is available and file logs can be written after the command completes without rerunning through a shell wrapper, save them under <artifact-dir>/logs-<repo-name>-<timestamp>/; otherwise mark the full-log path as n/a. If files change after a failed batch, none of that batch's successful results count as current verification.

Show verification as a compact table:

For failures or short outputs, show complete output in the relevant-output column or immediately below the table. For long successful outputs, show the relevant excerpt and log path.

On Failure: Auto-Fix

If compile/build, lint, or tests fail due to issues introduced by the review fixes:

1. Read the error output and identify every failure
2. Fix all issues — apply the minimal changes needed
3. Re-run the failing commands using the same safe batching rules
4. Show the complete output again

Cap at 2 fix attempts. If still failing after 2 rounds, present the remaining failures to the user with full output. Do not describe the work as done or commit-ready while compile/build status is failing or unknown for changed production code.

7. Present Results

Once verification passes (or the user has seen the remaining failures), present a summary table. If compile/build did not pass for code changes, say the work is not commit-ready before the table. Do NOT show a diff — the Edit tool already showed each change inline.

Also present a rollback/traceability table and the ledger path:

Ledger: <artifact-dir>/review-<repo-name>-<timestamp>.md, or n/a when no project-local artifact directory was available.

STOP and wait. The user decides what to commit.

8. Post-Fix

• If the user asks for changes, apply them
• If the user asks to revert specific fixes, revert ONLY those changes using surgical git checkout of the affected lines
• Do NOT commit. The user handles commits on their own terms.

Do it

commit and continue